Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
LRRC53A6NM62 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRC53A6NM62 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
LRRC53A6NM62 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
LRRC53A6NM62 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRC53A6NM62 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.71■■□□□ 1.23
LRRC53A6NM62 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.71■■□□□ 1.23
LRRC53A6NM62 AC008764.7-201ENST00000593779 1081 ntBASIC22.71■■□□□ 1.23
LRRC53A6NM62 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.71■■□□□ 1.23
LRRC53A6NM62 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.71■■□□□ 1.23
LRRC53A6NM62 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRC53A6NM62 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.23
LRRC53A6NM62 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.7■■□□□ 1.22
LRRC53A6NM62 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRC53A6NM62 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRC53A6NM62 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LRRC53A6NM62 LINC01521-201ENST00000504184 1943 ntBASIC22.69■■□□□ 1.22
LRRC53A6NM62 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 AC055733.4-201ENST00000638462 1354 ntBASIC22.68■■□□□ 1.22
LRRC53A6NM62 LINC01006-201ENST00000333319 2292 ntBASIC22.68■■□□□ 1.22
LRRC53A6NM62 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.68■■□□□ 1.22
LRRC53A6NM62 AC099791.1-201ENST00000416440 715 ntBASIC22.68■■□□□ 1.22
LRRC53A6NM62 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.68■■□□□ 1.22
LRRC53A6NM62 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.68■■□□□ 1.22
LRRC53A6NM62 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LRRC53A6NM62 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.68■■□□□ 1.22
LRRC53A6NM62 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRC53A6NM62 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.67■■□□□ 1.22
LRRC53A6NM62 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRC53A6NM62 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms