Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-1A0A0K0K1D8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-1A0A0K0K1D8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-1A0A0K0K1D8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 AC027702.1-201ENST00000563810 1770 ntBASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-1A0A0K0K1D8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
TRBV6-1A0A0K0K1D8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MIR4787-201ENST00000607364 84 ntBASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AP006587.3-201ENST00000525742 1516 ntBASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AC007225.1-201ENST00000566331 1836 ntBASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AL033527.3-201ENST00000566366 1196 ntBASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 AL162377.1-201ENST00000618844 1793 ntBASIC15.75■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-1A0A0K0K1D8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-1A0A0K0K1D8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV6-1A0A0K0K1D8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV6-1A0A0K0K1D8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms