Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC27.12■■□□□ 1.93
LOC102724428A0A0B4J2F2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC102724428A0A0B4J2F2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LOC102724428A0A0B4J2F2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LOC102724428A0A0B4J2F2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.1■■□□□ 1.93
LOC102724428A0A0B4J2F2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
LOC102724428A0A0B4J2F2 AL359736.2-201ENST00000621992 437 ntBASIC27.1■■□□□ 1.93
LOC102724428A0A0B4J2F2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.09■■□□□ 1.93
LOC102724428A0A0B4J2F2 AC139530.1-201ENST00000575312 1977 ntBASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 UBE2SP1-201ENST00000450587 669 ntBASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 NME6-213ENST00000451657 871 ntTSL 2 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 MME-217ENST00000616757 1315 ntTSL 5 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
LOC102724428A0A0B4J2F2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.08■■□□□ 1.92
LOC102724428A0A0B4J2F2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
LOC102724428A0A0B4J2F2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.07■■□□□ 1.92
LOC102724428A0A0B4J2F2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC091799.1-201ENST00000422823 811 ntBASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC060766.5-201ENST00000590539 871 ntBASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 FAM21FP-204ENST00000608637 956 ntBASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC102724428A0A0B4J2F2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 CYP2T3P-201ENST00000601990 817 ntBASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
LOC102724428A0A0B4J2F2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC003102.1-202ENST00000563394 1796 ntBASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 AC100791.3-201ENST00000617619 330 ntBASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 HLA-B-256ENST00000639848 1089 ntBASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
LOC102724428A0A0B4J2F2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms