Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 OR2I1P-207ENST00000453522 948 ntBASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV5A0A0B4J249 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 AP004607.7-201ENST00000527152 1677 ntBASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV5A0A0B4J249 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAV5A0A0B4J249 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV5A0A0B4J249 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 KRT16P3-201ENST00000439127 1283 ntBASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 AL121603.2-201ENST00000557373 2117 ntBASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV5A0A0B4J249 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 AL391422.3-201ENST00000603791 2761 ntBASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV5A0A0B4J249 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms