Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 AL592293.1-201ENST00000502889 1188 ntBASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV12-1A0A0B4J245 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-1A0A0B4J245 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 AC079089.2-201ENST00000531211 1277 ntBASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 PCDHAC2-203ENST00000615316 3011 ntBASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 AC020907.5-201ENST00000624372 1936 ntBASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-1A0A0B4J245 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-1A0A0B4J245 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 AC120024.1-201ENST00000562672 995 ntBASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 AC019171.1-201ENST00000601251 1056 ntBASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-1A0A0B4J245 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-1A0A0B4J245 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms