Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 YBX1P1-201ENST00000445822 960 ntBASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC026310.3-201ENST00000625186 2373 ntBASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 KRT87P-202ENST00000534226 1464 ntBASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 EEF1DP3-203ENST00000566025 782 ntBASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ZNRF2P3-201ENST00000424200 374 ntBASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV7-1A0A0A6YYK4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC007375.3-201ENST00000600936 2314 ntBASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV7-1A0A0A6YYK4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms