Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 AC021242.3-201ENST00000607598 1377 ntBASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3-BMI1R4GMX3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COMMD3-BMI1R4GMX3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COMMD3-BMI1R4GMX3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COMMD3-BMI1R4GMX3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
COMMD3-BMI1R4GMX3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COMMD3-BMI1R4GMX3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC144652.1-201ENST00000609974 1624 ntBASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3-BMI1R4GMX3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 BX664725.1-201ENST00000438252 379 ntBASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COMMD3-BMI1R4GMX3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 MIR6722-201ENST00000617286 78 ntBASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC005703.6-201ENST00000623265 1329 ntBASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COMMD3-BMI1R4GMX3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC098818.2-201ENST00000564925 2320 ntBASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD3-BMI1R4GMX3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
COMMD3-BMI1R4GMX3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms