Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
DDX49Q9Y6V7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 AC092437.1-201ENST00000624794 1048 ntBASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
DDX49Q9Y6V7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 AC027612.3-201ENST00000413684 1047 ntBASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
DDX49Q9Y6V7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 CCDC92B-201ENST00000575506 885 ntBASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
DDX49Q9Y6V7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 AL358852.1-201ENST00000623174 1268 ntBASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.22■■□□□ 1.63
DDX49Q9Y6V7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 LINC01960-201ENST00000563759 1884 ntBASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 AL157384.1-201ENST00000445995 2473 ntBASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.21■■□□□ 1.63
DDX49Q9Y6V7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DDX49Q9Y6V7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.2■■□□□ 1.62
DDX49Q9Y6V7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 AC004687.1-201ENST00000579003 1625 ntBASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.19■■□□□ 1.62
DDX49Q9Y6V7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms