Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 AC139530.1-201ENST00000575312 1977 ntBASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC32.37■■■□□ 2.77
CDC42BPBQ9Y5S2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 AL591742.1-201ENST00000604433 565 ntBASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CDC42BPBQ9Y5S2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDC42BPBQ9Y5S2 UNC93B4-201ENST00000505679 747 ntBASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDC42BPBQ9Y5S2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 AL355472.2-201ENST00000422958 438 ntBASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDC42BPBQ9Y5S2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDC42BPBQ9Y5S2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 AC091799.1-201ENST00000422823 811 ntBASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 AC060766.5-201ENST00000590539 871 ntBASIC32.31■■■□□ 2.76
CDC42BPBQ9Y5S2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPBQ9Y5S2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.3■■■□□ 2.76
CDC42BPBQ9Y5S2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.3■■■□□ 2.76
CDC42BPBQ9Y5S2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC32.3■■■□□ 2.76
CDC42BPBQ9Y5S2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPBQ9Y5S2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 AC073648.6-201ENST00000641589 218 ntBASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.29■■■□□ 2.76
CDC42BPBQ9Y5S2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
CDC42BPBQ9Y5S2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPBQ9Y5S2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms