Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAI2Q9Y5P3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAI2Q9Y5P3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RAI2Q9Y5P3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 AC004854.2-201ENST00000608450 1441 ntBASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 NTF6G-201ENST00000591094 616 ntBASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAI2Q9Y5P3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 AP004607.4-201ENST00000530158 1459 ntBASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 EEF1DP3-203ENST00000566025 782 ntBASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
RAI2Q9Y5P3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RAI2Q9Y5P3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.39■■□□□ 1.02
RAI2Q9Y5P3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
RAI2Q9Y5P3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAI2Q9Y5P3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 KRT18P61-201ENST00000585825 1298 ntBASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAI2Q9Y5P3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 AC053503.5-201ENST00000601508 636 ntBASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAI2Q9Y5P3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI2Q9Y5P3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 ABHD17AP1-201ENST00000358206 933 ntBASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 AC104187.1-201ENST00000607510 612 ntBASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI2Q9Y5P3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms