Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HRH3Q9Y5N1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.5■□□□□ 0.71
HRH3Q9Y5N1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HRH3Q9Y5N1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 AC016769.1-201ENST00000409132 1010 ntBASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 HLA-L-209ENST00000420110 1011 ntBASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 AC073111.5-205ENST00000641717 521 ntBASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 RNF165-205ENST00000588679 2904 ntBASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HRH3Q9Y5N1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 AC079140.4-201ENST00000507448 529 ntBASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 AC010542.4-201ENST00000563151 1910 ntBASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HRH3Q9Y5N1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HRH3Q9Y5N1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 AL034346.1-201ENST00000568244 1277 ntBASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
HRH3Q9Y5N1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 AC003102.1-202ENST00000563394 1796 ntBASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.44■□□□□ 0.7
HRH3Q9Y5N1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms