Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN16Q9Y5I7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 FBXW4P1-201ENST00000426721 2239 ntBASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 AC092666.2-201ENST00000613287 246 ntBASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN16Q9Y5I7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN16Q9Y5I7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
CLDN16Q9Y5I7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN16Q9Y5I7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 AC061975.6-201ENST00000579045 1553 ntBASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 AC137761.2-201ENST00000561729 223 ntBASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 AC145350.3-201ENST00000569033 163 ntBASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 AC244015.2-201ENST00000616358 1861 ntBASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN16Q9Y5I7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 KRT18P20-201ENST00000548986 1279 ntBASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 UBE2DNL-204ENST00000602536 740 ntBASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN16Q9Y5I7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms