Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KDM3AQ9Y4C1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.87■■□□□ 1.41
KDM3AQ9Y4C1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM3AQ9Y4C1 AC079140.4-201ENST00000507448 529 ntBASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 AC244015.2-201ENST00000616358 1861 ntBASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM3AQ9Y4C1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 CDCA4P2-201ENST00000441182 718 ntBASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 AC073111.5-205ENST00000641717 521 ntBASIC23.84■■□□□ 1.41
KDM3AQ9Y4C1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
KDM3AQ9Y4C1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
KDM3AQ9Y4C1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
KDM3AQ9Y4C1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 BID-214ENST00000617586 542 ntTSL 5 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM3AQ9Y4C1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 KRT18P11-201ENST00000435214 1283 ntBASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
KDM3AQ9Y4C1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms