Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 SUDS3P1-201ENST00000505831 966 ntBASIC18.99■□□□□ 0.63
ZNF346Q9UL40 AF213884.3-201ENST00000563833 479 ntBASIC18.99■□□□□ 0.63
ZNF346Q9UL40 AL031432.3-201ENST00000607698 485 ntBASIC18.99■□□□□ 0.63
ZNF346Q9UL40 AC105233.4-201ENST00000642045 216 ntBASIC18.99■□□□□ 0.63
ZNF346Q9UL40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF346Q9UL40 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 MIR939-201ENST00000401314 82 ntBASIC18.98■□□□□ 0.63
ZNF346Q9UL40 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 AC091305.1-201ENST00000479476 895 ntBASIC18.98■□□□□ 0.63
ZNF346Q9UL40 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ZNF346Q9UL40 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 RASA4CP-201ENST00000424092 1398 ntBASIC18.97■□□□□ 0.63
ZNF346Q9UL40 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 AL136967.2-201ENST00000623968 743 ntBASIC18.97■□□□□ 0.63
ZNF346Q9UL40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF346Q9UL40 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 AC009237.3-201ENST00000393279 1427 ntBASIC18.96■□□□□ 0.63
ZNF346Q9UL40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF346Q9UL40 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF346Q9UL40 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms