Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VTI1BQ9UEU0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 AL049796.1-201ENST00000565336 1766 ntBASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.74■□□□□ 0.91
VTI1BQ9UEU0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 AL034346.1-201ENST00000568244 1277 ntBASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 MIR4767-201ENST00000582827 78 ntBASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VTI1BQ9UEU0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 EDA-201ENST00000338901 1233 ntBASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VTI1BQ9UEU0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 MIR638-201ENST00000385237 100 ntBASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 AC010141.3-201ENST00000456659 717 ntBASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VTI1BQ9UEU0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 OR2I1P-207ENST00000453522 948 ntBASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 AL355001.2-201ENST00000620617 1191 ntBASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms