Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 AP004607.4-201ENST00000530158 1459 ntBASIC17.84■□□□□ 0.45
RNF7Q9UBF6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 EEF1DP3-203ENST00000566025 782 ntBASIC17.84■□□□□ 0.45
RNF7Q9UBF6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 FBXW4P1-201ENST00000426721 2239 ntBASIC17.84■□□□□ 0.45
RNF7Q9UBF6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF7Q9UBF6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF7Q9UBF6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF7Q9UBF6 AC004854.2-201ENST00000608450 1441 ntBASIC17.83■□□□□ 0.45
RNF7Q9UBF6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF7Q9UBF6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF7Q9UBF6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 KRT19P1-201ENST00000405746 1186 ntBASIC17.83■□□□□ 0.44
RNF7Q9UBF6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF7Q9UBF6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 KRT18P5-201ENST00000436075 1291 ntBASIC17.82■□□□□ 0.44
RNF7Q9UBF6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 AL162430.1-201ENST00000480705 870 ntBASIC17.82■□□□□ 0.44
RNF7Q9UBF6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 AC104187.1-201ENST00000607510 612 ntBASIC17.82■□□□□ 0.44
RNF7Q9UBF6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF7Q9UBF6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF7Q9UBF6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.8■□□□□ 0.44
RNF7Q9UBF6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF7Q9UBF6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms