Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.57■□□□□ 0.72
HPF1Q9NWY4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPF1Q9NWY4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPF1Q9NWY4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPF1Q9NWY4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 AC138907.5-202ENST00000569484 235 ntBASIC19.55■□□□□ 0.72
HPF1Q9NWY4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPF1Q9NWY4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 AC080038.1-201ENST00000611274 1154 ntBASIC19.54■□□□□ 0.72
HPF1Q9NWY4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPF1Q9NWY4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 AC010141.2-201ENST00000452426 721 ntBASIC19.53■□□□□ 0.72
HPF1Q9NWY4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 EEF1DP3-203ENST00000566025 782 ntBASIC19.53■□□□□ 0.72
HPF1Q9NWY4 AC053503.5-201ENST00000601508 636 ntBASIC19.53■□□□□ 0.72
HPF1Q9NWY4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPF1Q9NWY4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPF1Q9NWY4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HPF1Q9NWY4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HPF1Q9NWY4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
HPF1Q9NWY4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPF1Q9NWY4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPF1Q9NWY4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HPF1Q9NWY4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.51■□□□□ 0.71
HPF1Q9NWY4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms