Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MKKSQ9NPJ1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
MKKSQ9NPJ1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
MKKSQ9NPJ1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MKKSQ9NPJ1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MKKSQ9NPJ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MKKSQ9NPJ1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MKKSQ9NPJ1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MKKSQ9NPJ1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
MKKSQ9NPJ1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
MKKSQ9NPJ1 KRT18P20-201ENST00000548986 1279 ntBASIC20■□□□□ 0.79
MKKSQ9NPJ1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20■□□□□ 0.79
MKKSQ9NPJ1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MKKSQ9NPJ1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20■□□□□ 0.79
MKKSQ9NPJ1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MKKSQ9NPJ1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 AC080038.1-201ENST00000611274 1154 ntBASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MKKSQ9NPJ1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 AC090192.1-201ENST00000517740 490 ntBASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 AC003102.1-202ENST00000563394 1796 ntBASIC19.97■□□□□ 0.79
MKKSQ9NPJ1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms