Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSU72Q9NP77 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.01■□□□□ 0.95
SSU72Q9NP77 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSU72Q9NP77 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSU72Q9NP77 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SSU72Q9NP77 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SSU72Q9NP77 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.01■□□□□ 0.95
SSU72Q9NP77 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21■□□□□ 0.95
SSU72Q9NP77 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSU72Q9NP77 AC007952.6-201ENST00000573168 2673 ntBASIC21■□□□□ 0.95
SSU72Q9NP77 AC003957.1-201ENST00000625108 2673 ntBASIC21■□□□□ 0.95
SSU72Q9NP77 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSU72Q9NP77 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SSU72Q9NP77 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SSU72Q9NP77 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.99■□□□□ 0.95
SSU72Q9NP77 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.99■□□□□ 0.95
SSU72Q9NP77 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.99■□□□□ 0.95
SSU72Q9NP77 MIR6724-1-201ENST00000616420 92 ntBASIC20.99■□□□□ 0.95
SSU72Q9NP77 MIR6724-2-201ENST00000616483 92 ntBASIC20.99■□□□□ 0.95
SSU72Q9NP77 MIR6724-4-201ENST00000617390 92 ntBASIC20.99■□□□□ 0.95
SSU72Q9NP77 MIR6724-3-201ENST00000622482 92 ntBASIC20.99■□□□□ 0.95
SSU72Q9NP77 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSU72Q9NP77 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SSU72Q9NP77 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSU72Q9NP77 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.98■□□□□ 0.95
SSU72Q9NP77 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SSU72Q9NP77 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSU72Q9NP77 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSU72Q9NP77 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 MIR3181-201ENST00000578512 73 ntBASIC20.97■□□□□ 0.95
SSU72Q9NP77 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SSU72Q9NP77 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSU72Q9NP77 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSU72Q9NP77 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 AC099791.2-201ENST00000605725 427 ntBASIC20.96■□□□□ 0.95
SSU72Q9NP77 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSU72Q9NP77 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSU72Q9NP77 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SSU72Q9NP77 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 AP006587.3-201ENST00000525742 1516 ntBASIC20.95■□□□□ 0.94
SSU72Q9NP77 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.95■□□□□ 0.94
SSU72Q9NP77 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSU72Q9NP77 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms