Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.48■□□□□ 0.87
CLK4Q9HAZ1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 OR7E47P-201ENST00000546390 1422 ntBASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 AC027612.3-201ENST00000413684 1047 ntBASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 AL034346.1-201ENST00000568244 1277 ntBASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLK4Q9HAZ1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLK4Q9HAZ1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 AC010542.4-201ENST00000563151 1910 ntBASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLK4Q9HAZ1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 AC123595.1-201ENST00000440769 1046 ntBASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLK4Q9HAZ1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 BX005040.4-201ENST00000637145 1518 ntBASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLK4Q9HAZ1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 996 ms