Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRF2Q9HAW0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 AF106564.1-201ENST00000607058 2553 ntBASIC20.23■□□□□ 0.83
BRF2Q9HAW0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 AL358852.1-201ENST00000623174 1268 ntBASIC20.23■□□□□ 0.83
BRF2Q9HAW0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BRF2Q9HAW0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BRF2Q9HAW0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 AC005837.3-201ENST00000612163 286 ntBASIC20.21■□□□□ 0.83
BRF2Q9HAW0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRF2Q9HAW0 AL049796.1-201ENST00000565336 1766 ntBASIC20.21■□□□□ 0.83
BRF2Q9HAW0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
BRF2Q9HAW0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.2■□□□□ 0.82
BRF2Q9HAW0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.19■□□□□ 0.82
BRF2Q9HAW0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRF2Q9HAW0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BRF2Q9HAW0 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
BRF2Q9HAW0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.17■□□□□ 0.82
BRF2Q9HAW0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRF2Q9HAW0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRF2Q9HAW0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.17■□□□□ 0.82
BRF2Q9HAW0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms