Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.1■■□□□ 1.29
KCNF1Q9H3M0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 RARRES2P2-201ENST00000394842 485 ntBASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNF1Q9H3M0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 AC020907.5-201ENST00000624372 1936 ntBASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 AC003102.1-202ENST00000563394 1796 ntBASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
KCNF1Q9H3M0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.08■■□□□ 1.28
KCNF1Q9H3M0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNF1Q9H3M0 AL162377.1-201ENST00000618844 1793 ntBASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 AC010980.1-201ENST00000587192 1142 ntBASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 BHLHE23-202ENST00000612929 1109 ntBASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 AL512408.1-201ENST00000569378 2000 ntBASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
KCNF1Q9H3M0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
KCNF1Q9H3M0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms