Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 AP001330.3-201ENST00000520123 633 ntBASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 AC106739.1-201ENST00000617035 715 ntBASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 SLC25A24-204ENST00000569674 2357 ntBASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 PBX2P1-201ENST00000493219 1291 ntBASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.5■□□□□ 0.71
RSPO3Q9BXY4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RSPO3Q9BXY4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 TSPY26P-201ENST00000476365 1326 ntBASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RSPO3Q9BXY4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 AC008406.3-201ENST00000620001 1374 ntBASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RSPO3Q9BXY4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 PLK5-205ENST00000642079 1969 ntBASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 AL136967.2-201ENST00000623968 743 ntBASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO3Q9BXY4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms