Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GFI1Q99684 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.27■□□□□ 0.52
GFI1Q99684 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GFI1Q99684 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 MIR3181-201ENST00000578512 73 ntBASIC18.27■□□□□ 0.52
GFI1Q99684 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GFI1Q99684 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.27■□□□□ 0.52
GFI1Q99684 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GFI1Q99684 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GFI1Q99684 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GFI1Q99684 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
GFI1Q99684 AFG3L1P-217ENST00000557444 2447 ntBASIC18.27■□□□□ 0.51
GFI1Q99684 PKD1P6-201ENST00000343738 4769 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.26■□□□□ 0.51
GFI1Q99684 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GFI1Q99684 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GFI1Q99684 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GFI1Q99684 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.26■□□□□ 0.51
GFI1Q99684 AP004607.7-201ENST00000527152 1677 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.26■□□□□ 0.51
GFI1Q99684 MIR6724-1-201ENST00000616420 92 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 MIR6724-2-201ENST00000616483 92 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 MIR6724-4-201ENST00000617390 92 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 MIR6724-3-201ENST00000622482 92 ntBASIC18.26■□□□□ 0.51
GFI1Q99684 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
GFI1Q99684 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
GFI1Q99684 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GFI1Q99684 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFI1Q99684 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GFI1Q99684 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.25■□□□□ 0.51
GFI1Q99684 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 AC087239.1-201ENST00000622671 572 ntBASIC18.25■□□□□ 0.51
GFI1Q99684 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GFI1Q99684 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.25■□□□□ 0.51
GFI1Q99684 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
GFI1Q99684 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFI1Q99684 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
GFI1Q99684 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.24■□□□□ 0.51
GFI1Q99684 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.24■□□□□ 0.51
GFI1Q99684 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 UNC93B8-201ENST00000511903 705 ntBASIC18.24■□□□□ 0.51
GFI1Q99684 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
GFI1Q99684 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.24■□□□□ 0.51
GFI1Q99684 AL034346.1-201ENST00000568244 1277 ntBASIC18.24■□□□□ 0.51
GFI1Q99684 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
GFI1Q99684 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.24■□□□□ 0.51
GFI1Q99684 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.24■□□□□ 0.51
GFI1Q99684 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 AC027702.1-201ENST00000563810 1770 ntBASIC18.24■□□□□ 0.51
GFI1Q99684 PCDHAC2-203ENST00000615316 3011 ntBASIC18.24■□□□□ 0.51
GFI1Q99684 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GFI1Q99684 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GFI1Q99684 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFI1Q99684 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFI1Q99684 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.23■□□□□ 0.51
GFI1Q99684 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GFI1Q99684 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GFI1Q99684 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms