Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A3Q99624 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A3Q99624 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A3Q99624 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC38A3Q99624 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC38A3Q99624 AL355802.2-201ENST00000402069 882 ntBASIC20.51■□□□□ 0.87
SLC38A3Q99624 POU5F1P4-201ENST00000413175 1085 ntBASIC20.51■□□□□ 0.87
SLC38A3Q99624 AL121832.2-201ENST00000610979 668 ntBASIC20.51■□□□□ 0.87
SLC38A3Q99624 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC38A3Q99624 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC38A3Q99624 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SLC38A3Q99624 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC38A3Q99624 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC38A3Q99624 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC38A3Q99624 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC38A3Q99624 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC38A3Q99624 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 TERF1P5-201ENST00000477545 1207 ntBASIC20.49■□□□□ 0.87
SLC38A3Q99624 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 AL050303.2-201ENST00000619798 666 ntBASIC20.49■□□□□ 0.87
SLC38A3Q99624 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 AC013268.1-206ENST00000638368 961 ntBASIC20.49■□□□□ 0.87
SLC38A3Q99624 AC112229.1-201ENST00000639295 961 ntBASIC20.49■□□□□ 0.87
SLC38A3Q99624 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC38A3Q99624 AC012676.1-201ENST00000574705 1949 ntBASIC20.49■□□□□ 0.87
SLC38A3Q99624 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SLC38A3Q99624 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A3Q99624 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 CNN2P6-201ENST00000439038 900 ntBASIC20.48■□□□□ 0.87
SLC38A3Q99624 AC083906.2-201ENST00000511578 360 ntBASIC20.48■□□□□ 0.87
SLC38A3Q99624 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A3Q99624 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A3Q99624 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC38A3Q99624 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 AC003102.1-202ENST00000563394 1796 ntBASIC20.48■□□□□ 0.87
SLC38A3Q99624 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC38A3Q99624 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC38A3Q99624 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC38A3Q99624 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SLC38A3Q99624 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC38A3Q99624 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC38A3Q99624 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC38A3Q99624 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC38A3Q99624 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SLC38A3Q99624 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC38A3Q99624 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms