Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
CMTM3Q96MX0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.18■□□□□ 0.5
CMTM3Q96MX0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 PLK5-205ENST00000642079 1969 ntBASIC18.17■□□□□ 0.5
CMTM3Q96MX0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CMTM3Q96MX0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 ABHD17AP5-201ENST00000580133 923 ntBASIC18.16■□□□□ 0.5
CMTM3Q96MX0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.16■□□□□ 0.5
CMTM3Q96MX0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 AC020907.5-201ENST00000624372 1936 ntBASIC18.15■□□□□ 0.5
CMTM3Q96MX0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CMTM3Q96MX0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CMTM3Q96MX0 AC003102.1-202ENST00000563394 1796 ntBASIC18.14■□□□□ 0.5
CMTM3Q96MX0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.14■□□□□ 0.5
CMTM3Q96MX0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
CMTM3Q96MX0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 AC010980.1-201ENST00000587192 1142 ntBASIC18.14■□□□□ 0.49
CMTM3Q96MX0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 AC021242.3-201ENST00000607598 1377 ntBASIC18.14■□□□□ 0.49
CMTM3Q96MX0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMTM3Q96MX0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms