Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 AC006015.1-201ENST00000429970 570 ntBASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 KRT87P-202ENST00000534226 1464 ntBASIC20.88■□□□□ 0.93
SH3KBP1Q96B97 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 KRT18P11-201ENST00000435214 1283 ntBASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 AC090192.1-201ENST00000517740 490 ntBASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 KRT18P61-201ENST00000585825 1298 ntBASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SH3KBP1Q96B97 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3KBP1Q96B97 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 AC092053.2-201ENST00000640557 1818 ntBASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3KBP1Q96B97 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms