Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 AC136469.2-201ENST00000623944 1028 ntBASIC18.97■□□□□ 0.63
PTP4A1Q93096 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.97■□□□□ 0.63
PTP4A1Q93096 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTP4A1Q93096 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PTP4A1Q93096 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.96■□□□□ 0.63
PTP4A1Q93096 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PTP4A1Q93096 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 SLC47A1P1-202ENST00000449666 945 ntBASIC18.96■□□□□ 0.63
PTP4A1Q93096 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTP4A1Q93096 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTP4A1Q93096 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTP4A1Q93096 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTP4A1Q93096 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.95■□□□□ 0.62
PTP4A1Q93096 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTP4A1Q93096 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PTP4A1Q93096 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.95■□□□□ 0.62
PTP4A1Q93096 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTP4A1Q93096 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PTP4A1Q93096 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.94■□□□□ 0.62
PTP4A1Q93096 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
PTP4A1Q93096 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.94■□□□□ 0.62
PTP4A1Q93096 AC096631.2-201ENST00000436136 790 ntBASIC18.94■□□□□ 0.62
PTP4A1Q93096 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTP4A1Q93096 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
PTP4A1Q93096 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 AL136162.1-201ENST00000607711 1078 ntBASIC18.93■□□□□ 0.62
PTP4A1Q93096 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PTP4A1Q93096 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTP4A1Q93096 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.92■□□□□ 0.62
PTP4A1Q93096 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 FEM1AP1-201ENST00000431297 1995 ntBASIC18.92■□□□□ 0.62
PTP4A1Q93096 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.92■□□□□ 0.62
PTP4A1Q93096 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.92■□□□□ 0.62
PTP4A1Q93096 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
PTP4A1Q93096 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms