Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.15■□□□□ 0.66
HPS1Q92902 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.15■□□□□ 0.66
HPS1Q92902 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HPS1Q92902 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 EDA-201ENST00000338901 1233 ntBASIC19.14■□□□□ 0.65
HPS1Q92902 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HPS1Q92902 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HPS1Q92902 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HPS1Q92902 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HPS1Q92902 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HPS1Q92902 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
HPS1Q92902 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS1Q92902 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.13■□□□□ 0.65
HPS1Q92902 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HPS1Q92902 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.13■□□□□ 0.65
HPS1Q92902 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS1Q92902 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HPS1Q92902 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS1Q92902 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS1Q92902 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HPS1Q92902 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS1Q92902 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
HPS1Q92902 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.12■□□□□ 0.65
HPS1Q92902 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HPS1Q92902 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS1Q92902 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPS1Q92902 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.11■□□□□ 0.65
HPS1Q92902 AL355001.2-201ENST00000620617 1191 ntBASIC19.11■□□□□ 0.65
HPS1Q92902 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS1Q92902 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS1Q92902 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS1Q92902 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HPS1Q92902 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HPS1Q92902 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HPS1Q92902 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS1Q92902 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
HPS1Q92902 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms