Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CASKIN1Q8WXD9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CASKIN1Q8WXD9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
CASKIN1Q8WXD9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC33.18■■■□□ 2.9
CASKIN1Q8WXD9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 C1orf229-201ENST00000623686 2258 ntBASIC33.17■■■□□ 2.9
CASKIN1Q8WXD9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CASKIN1Q8WXD9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 RARRES2P4-201ENST00000514074 484 ntBASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 TMEM191A-211ENST00000637163 1067 ntBASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC33.15■■■□□ 2.9
CASKIN1Q8WXD9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC33.14■■■□□ 2.9
CASKIN1Q8WXD9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 AC010980.2-201ENST00000587099 1412 ntBASIC33.13■■■□□ 2.89
CASKIN1Q8WXD9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 AL591742.1-201ENST00000604433 565 ntBASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC33.12■■■□□ 2.89
CASKIN1Q8WXD9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 AC008694.1-202ENST00000636953 945 ntBASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
CASKIN1Q8WXD9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 BX276092.2-201ENST00000417668 665 ntBASIC33.1■■■□□ 2.89
CASKIN1Q8WXD9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CASKIN1Q8WXD9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 FAM99A-202ENST00000538190 1989 ntBASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 AC091799.1-201ENST00000422823 811 ntBASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CASKIN1Q8WXD9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC33.07■■■□□ 2.88
CASKIN1Q8WXD9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC33.06■■■□□ 2.88
CASKIN1Q8WXD9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms