Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4IP1Q8WWV3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 AL031602.1-201ENST00000633169 911 ntBASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTN4IP1Q8WWV3 AC026471.6-201ENST00000622954 1905 ntBASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RTN4IP1Q8WWV3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 AL136162.1-201ENST00000607711 1078 ntBASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 AC068587.7-201ENST00000641602 218 ntBASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RTN4IP1Q8WWV3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTN4IP1Q8WWV3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
RTN4IP1Q8WWV3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 AC096631.2-201ENST00000436136 790 ntBASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 AC079089.2-201ENST00000531211 1277 ntBASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 AC135279.3-201ENST00000610945 1311 ntBASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN4IP1Q8WWV3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 AC024257.2-201ENST00000549699 147 ntBASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 MIR4767-201ENST00000582827 78 ntBASIC17.69■□□□□ 0.42
RTN4IP1Q8WWV3 AC010525.1-201ENST00000585559 441 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms