Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHROOM3Q8TF72 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 EEF1DP3-203ENST00000566025 782 ntBASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHROOM3Q8TF72 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 YBX1P1-201ENST00000445822 960 ntBASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 AC104187.1-201ENST00000607510 612 ntBASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHROOM3Q8TF72 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHROOM3Q8TF72 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHROOM3Q8TF72 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 FEM1AP4-201ENST00000443167 1987 ntBASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHROOM3Q8TF72 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHROOM3Q8TF72 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHROOM3Q8TF72 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHROOM3Q8TF72 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.58■■□□□ 1.05
SHROOM3Q8TF72 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHROOM3Q8TF72 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.58■■□□□ 1.04
SHROOM3Q8TF72 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHROOM3Q8TF72 AL024507.2-201ENST00000606070 2574 ntBASIC21.58■■□□□ 1.04
SHROOM3Q8TF72 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SHROOM3Q8TF72 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM3Q8TF72 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms