Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNED1Q8TER0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SNED1Q8TER0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SNED1Q8TER0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 AC008175.2-201ENST00000612840 297 ntBASIC25.99■■□□□ 1.75
SNED1Q8TER0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SNED1Q8TER0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SNED1Q8TER0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SNED1Q8TER0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SNED1Q8TER0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
SNED1Q8TER0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.98■■□□□ 1.75
SNED1Q8TER0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.98■■□□□ 1.75
SNED1Q8TER0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNED1Q8TER0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.97■■□□□ 1.75
SNED1Q8TER0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.97■■□□□ 1.75
SNED1Q8TER0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.97■■□□□ 1.75
SNED1Q8TER0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SNED1Q8TER0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNED1Q8TER0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SNED1Q8TER0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNED1Q8TER0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNED1Q8TER0 KRT17P1-201ENST00000399211 1546 ntBASIC25.96■■□□□ 1.75
SNED1Q8TER0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SNED1Q8TER0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNED1Q8TER0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNED1Q8TER0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.96■■□□□ 1.75
SNED1Q8TER0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.95■■□□□ 1.75
SNED1Q8TER0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
SNED1Q8TER0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNED1Q8TER0 AC137767.1-201ENST00000602918 1920 ntBASIC25.95■■□□□ 1.74
SNED1Q8TER0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNED1Q8TER0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SNED1Q8TER0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.95■■□□□ 1.74
SNED1Q8TER0 AC008550.1-201ENST00000511500 884 ntBASIC25.95■■□□□ 1.74
SNED1Q8TER0 AC120498.10-201ENST00000621827 505 ntBASIC25.95■■□□□ 1.74
SNED1Q8TER0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNED1Q8TER0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 AL359736.2-201ENST00000621992 437 ntBASIC25.94■■□□□ 1.74
SNED1Q8TER0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNED1Q8TER0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.94■■□□□ 1.74
SNED1Q8TER0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNED1Q8TER0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.93■■□□□ 1.74
SNED1Q8TER0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SNED1Q8TER0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.93■■□□□ 1.74
SNED1Q8TER0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNED1Q8TER0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
SNED1Q8TER0 AC061975.6-201ENST00000579045 1553 ntBASIC25.92■■□□□ 1.74
SNED1Q8TER0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
SNED1Q8TER0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SNED1Q8TER0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.92■■□□□ 1.74
SNED1Q8TER0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SNED1Q8TER0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNED1Q8TER0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNED1Q8TER0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SNED1Q8TER0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.91■■□□□ 1.74
SNED1Q8TER0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.9■■□□□ 1.74
SNED1Q8TER0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.9■■□□□ 1.74
SNED1Q8TER0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms