Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 AC097493.4-201ENST00000641197 219 ntBASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ALMS1Q8TCU4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 AC060766.5-201ENST00000590539 871 ntBASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ALMS1Q8TCU4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 RPS2P55-201ENST00000397318 883 ntBASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ALMS1Q8TCU4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 AC079089.2-201ENST00000531211 1277 ntBASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 TSPY7P-201ENST00000431358 1114 ntBASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALMS1Q8TCU4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC233702.5-201ENST00000584107 538 ntBASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC053503.5-201ENST00000601508 636 ntBASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AL591742.1-201ENST00000604433 565 ntBASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms