Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AC073314.1-201ENST00000568729 2216 ntBASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 AP005212.1-201ENST00000581547 1997 ntBASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 Z92544.1-202ENST00000571933 1220 ntBASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.84■□□□□ 0.93
RFWD2Q8NHY2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD2Q8NHY2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
RFWD2Q8NHY2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 TSPY9P-201ENST00000440215 945 ntBASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 TSPY11P-201ENST00000442607 1045 ntBASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RFWD2Q8NHY2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RFWD2Q8NHY2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD2Q8NHY2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms