Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.26■□□□□ 0.83
CLHC1Q8NHS4 AC135279.3-201ENST00000610945 1311 ntBASIC20.26■□□□□ 0.83
CLHC1Q8NHS4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 AC233992.3-201ENST00000607491 485 ntBASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLHC1Q8NHS4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.24■□□□□ 0.83
CLHC1Q8NHS4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 AC008764.7-201ENST00000593779 1081 ntBASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLHC1Q8NHS4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 AC008406.3-201ENST00000620001 1374 ntBASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 AC096631.2-201ENST00000436136 790 ntBASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLHC1Q8NHS4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 AL157384.1-201ENST00000445995 2473 ntBASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLHC1Q8NHS4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
CLHC1Q8NHS4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CLHC1Q8NHS4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.2■□□□□ 0.82
CLHC1Q8NHS4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms