Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 AC120498.9-201ENST00000339021 3867 ntBASIC6.48□□□□□ -1.37
SYNE1Q8NF91 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 AC005181.1-201ENST00000604782 1256 ntBASIC6.48□□□□□ -1.37
SYNE1Q8NF91 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE1Q8NF91 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC079140.4-201ENST00000507448 529 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 TERF1P5-201ENST00000477545 1207 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 BRI3-207ENST00000539286 699 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC105036.2-201ENST00000569468 176 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC092118.2-201ENST00000613495 667 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC093787.1-201ENST00000450396 207 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC098590.1-201ENST00000468126 897 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AF201337.1-201ENST00000520239 748 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC098934.4-201ENST00000564127 592 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 AC104187.1-201ENST00000607510 612 ntBASIC6.47□□□□□ -1.37
SYNE1Q8NF91 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE1Q8NF91 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 AC007322.4-201ENST00000509611 723 ntBASIC6.46□□□□□ -1.37
SYNE1Q8NF91 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
SYNE1Q8NF91 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms