Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 POU5F1P4-201ENST00000413175 1085 ntBASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 AC231657.2-201ENST00000624556 255 ntBASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PDZD8Q8NEN9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 AC003102.1-202ENST00000563394 1796 ntBASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDZD8Q8NEN9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 ID1-201ENST00000376105 1233 ntBASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.15■■□□□ 1.14
PDZD8Q8NEN9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PDZD8Q8NEN9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 DUX4L16-201ENST00000555130 1264 ntBASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 AC068473.5-201ENST00000616428 2072 ntBASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDZD8Q8NEN9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 AC242852.2-201ENST00000615738 1807 ntBASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 AC006970.2-201ENST00000450065 779 ntBASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 AC010536.3-201ENST00000620306 533 ntBASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDZD8Q8NEN9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDZD8Q8NEN9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms