Protein–RNA interactions for Protein: Q8IYK4

COLGALT2, Procollagen galactosyltransferase 2, humanhuman

Predictions only

Length 626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2Q8IYK4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COLGALT2Q8IYK4 AC127496.7-201ENST00000625110 1798 ntBASIC22.71■■□□□ 1.23
COLGALT2Q8IYK4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COLGALT2Q8IYK4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COLGALT2Q8IYK4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COLGALT2Q8IYK4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.7■■□□□ 1.23
COLGALT2Q8IYK4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 AC133041.1-202ENST00000642053 222 ntBASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.7■■□□□ 1.22
COLGALT2Q8IYK4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 AC061975.6-201ENST00000579045 1553 ntBASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 AC098934.4-201ENST00000564127 592 ntBASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COLGALT2Q8IYK4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 RBM17P2-201ENST00000616397 1405 ntBASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 OR10C1-204ENST00000622521 1039 ntBASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 C9orf163-202ENST00000624034 2573 ntBASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COLGALT2Q8IYK4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COLGALT2Q8IYK4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 AL512625.2-201ENST00000417533 625 ntBASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 AC093787.1-201ENST00000450396 207 ntBASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 MKRN4P-201ENST00000444706 1521 ntBASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COLGALT2Q8IYK4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 MIPEPP3-201ENST00000412105 444 ntBASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 AC069236.1-201ENST00000604339 616 ntBASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 AC016405.3-201ENST00000607710 860 ntBASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 AC026471.6-201ENST00000622954 1905 ntBASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 AC133561.1-201ENST00000568600 2415 ntBASIC22.65■■□□□ 1.22
COLGALT2Q8IYK4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.64■■□□□ 1.22
COLGALT2Q8IYK4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COLGALT2Q8IYK4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms