Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SLX4Q8IY92 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.11■■□□□ 1.77
SLX4Q8IY92 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLX4Q8IY92 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.11■■□□□ 1.77
SLX4Q8IY92 AC061975.6-201ENST00000579045 1553 ntBASIC26.11■■□□□ 1.77
SLX4Q8IY92 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLX4Q8IY92 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.11■■□□□ 1.77
SLX4Q8IY92 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLX4Q8IY92 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.1■■□□□ 1.77
SLX4Q8IY92 AC060766.5-201ENST00000590539 871 ntBASIC26.1■■□□□ 1.77
SLX4Q8IY92 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLX4Q8IY92 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.1■■□□□ 1.77
SLX4Q8IY92 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
SLX4Q8IY92 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLX4Q8IY92 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.1■■□□□ 1.77
SLX4Q8IY92 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLX4Q8IY92 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLX4Q8IY92 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLX4Q8IY92 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLX4Q8IY92 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLX4Q8IY92 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLX4Q8IY92 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.09■■□□□ 1.77
SLX4Q8IY92 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLX4Q8IY92 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.08■■□□□ 1.77
SLX4Q8IY92 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
SLX4Q8IY92 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLX4Q8IY92 UBE2SP1-201ENST00000450587 669 ntBASIC26.08■■□□□ 1.77
SLX4Q8IY92 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.08■■□□□ 1.77
SLX4Q8IY92 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLX4Q8IY92 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLX4Q8IY92 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLX4Q8IY92 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLX4Q8IY92 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLX4Q8IY92 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLX4Q8IY92 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.07■■□□□ 1.76
SLX4Q8IY92 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLX4Q8IY92 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLX4Q8IY92 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLX4Q8IY92 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLX4Q8IY92 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
SLX4Q8IY92 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLX4Q8IY92 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLX4Q8IY92 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.05■■□□□ 1.76
SLX4Q8IY92 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLX4Q8IY92 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLX4Q8IY92 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLX4Q8IY92 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.04■■□□□ 1.76
SLX4Q8IY92 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLX4Q8IY92 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLX4Q8IY92 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLX4Q8IY92 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLX4Q8IY92 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLX4Q8IY92 LSM12P1-201ENST00000411836 588 ntBASIC26.03■■□□□ 1.76
SLX4Q8IY92 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.03■■□□□ 1.76
SLX4Q8IY92 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.03■■□□□ 1.76
SLX4Q8IY92 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SLX4Q8IY92 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.03■■□□□ 1.76
SLX4Q8IY92 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 MIR4497-201ENST00000583208 89 ntBASIC26.02■■□□□ 1.76
SLX4Q8IY92 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.02■■□□□ 1.76
SLX4Q8IY92 FAM197Y4-202ENST00000622692 608 ntBASIC26.02■■□□□ 1.76
SLX4Q8IY92 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms