Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 AL356441.2-201ENST00000443009 864 ntBASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRIM42Q8IWZ5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 UNC93B8-201ENST00000511903 705 ntBASIC21■□□□□ 0.95
TRIM42Q8IWZ5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 AC241377.3-202ENST00000626088 1088 ntBASIC21■□□□□ 0.95
TRIM42Q8IWZ5 AC241585.3-202ENST00000628937 1088 ntBASIC21■□□□□ 0.95
TRIM42Q8IWZ5 AC245100.8-202ENST00000629247 1058 ntBASIC21■□□□□ 0.95
TRIM42Q8IWZ5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM42Q8IWZ5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 AL034346.1-201ENST00000568244 1277 ntBASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 AC087239.1-201ENST00000622671 572 ntBASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
TRIM42Q8IWZ5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM42Q8IWZ5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms