Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 AC080038.1-201ENST00000611274 1154 ntBASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM48Q8IWZ4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.91
TRIM48Q8IWZ4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM48Q8IWZ4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 AC138907.5-202ENST00000569484 235 ntBASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM48Q8IWZ4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 AC010141.2-201ENST00000452426 721 ntBASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 AC053503.5-201ENST00000601508 636 ntBASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM48Q8IWZ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 EEF1DP3-203ENST00000566025 782 ntBASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 UBE2DNL-204ENST00000602536 740 ntBASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 AC011767.1-201ENST00000617410 1153 ntBASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM48Q8IWZ4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM48Q8IWZ4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM48Q8IWZ4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM48Q8IWZ4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM48Q8IWZ4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM48Q8IWZ4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM48Q8IWZ4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms