Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 AC012414.1-201ENST00000556676 535 ntBASIC19.77■□□□□ 0.76
CCDC71Q8IV32 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC71Q8IV32 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71Q8IV32 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71Q8IV32 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71Q8IV32 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71Q8IV32 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71Q8IV32 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 AC027612.3-201ENST00000413684 1047 ntBASIC19.76■□□□□ 0.75
CCDC71Q8IV32 AC090192.1-201ENST00000517740 490 ntBASIC19.76■□□□□ 0.75
CCDC71Q8IV32 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 AL499627.2-201ENST00000606283 725 ntBASIC19.76■□□□□ 0.75
CCDC71Q8IV32 RARRES2P11-201ENST00000635158 484 ntBASIC19.76■□□□□ 0.75
CCDC71Q8IV32 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC71Q8IV32 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 AL137784.2-201ENST00000607332 1000 ntBASIC19.75■□□□□ 0.75
CCDC71Q8IV32 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71Q8IV32 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 AC092667.1-201ENST00000434301 2586 ntBASIC19.74■□□□□ 0.75
CCDC71Q8IV32 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 AC123595.1-201ENST00000440769 1046 ntBASIC19.74■□□□□ 0.75
CCDC71Q8IV32 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 AL121603.2-201ENST00000557373 2117 ntBASIC19.74■□□□□ 0.75
CCDC71Q8IV32 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71Q8IV32 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 LINC01521-201ENST00000504184 1943 ntBASIC19.73■□□□□ 0.75
CCDC71Q8IV32 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 DUX4L4-201ENST00000566884 1269 ntBASIC19.73■□□□□ 0.75
CCDC71Q8IV32 AL354811.1-201ENST00000610286 706 ntBASIC19.73■□□□□ 0.75
CCDC71Q8IV32 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71Q8IV32 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71Q8IV32 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms