Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 PBX2P1-201ENST00000493219 1291 ntBASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 LINC01006-201ENST00000333319 2292 ntBASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CRLF3Q8IUI8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 OR7E47P-201ENST00000546390 1422 ntBASIC21.02■□□□□ 0.96
CRLF3Q8IUI8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRLF3Q8IUI8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 AL136162.1-201ENST00000607711 1078 ntBASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 AC005837.3-201ENST00000612163 286 ntBASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 AC106739.1-201ENST00000617035 715 ntBASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRLF3Q8IUI8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CRLF3Q8IUI8 AL031602.1-201ENST00000633169 911 ntBASIC21■□□□□ 0.95
CRLF3Q8IUI8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRLF3Q8IUI8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRLF3Q8IUI8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CRLF3Q8IUI8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CRLF3Q8IUI8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CRLF3Q8IUI8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 AC133561.4-201ENST00000566112 224 ntBASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CRLF3Q8IUI8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CRLF3Q8IUI8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CRLF3Q8IUI8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms