Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.75■■□□□ 1.07
CCDC25Q86WR0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 AC087239.1-201ENST00000622671 572 ntBASIC21.75■■□□□ 1.07
CCDC25Q86WR0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC25Q86WR0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 AC068587.7-201ENST00000641602 218 ntBASIC21.74■■□□□ 1.07
CCDC25Q86WR0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC25Q86WR0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 AL049796.1-201ENST00000565336 1766 ntBASIC21.73■■□□□ 1.07
CCDC25Q86WR0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC25Q86WR0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC25Q86WR0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 AC010141.3-201ENST00000456659 717 ntBASIC21.71■■□□□ 1.07
CCDC25Q86WR0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 MIR3181-201ENST00000578512 73 ntBASIC21.71■■□□□ 1.07
CCDC25Q86WR0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC25Q86WR0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC25Q86WR0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.7■■□□□ 1.07
CCDC25Q86WR0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.7■■□□□ 1.07
CCDC25Q86WR0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC25Q86WR0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC25Q86WR0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms