Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SHFQ7M4L6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
SHFQ7M4L6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.03■□□□□ 0.64
SHFQ7M4L6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHFQ7M4L6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHFQ7M4L6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SHFQ7M4L6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHFQ7M4L6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHFQ7M4L6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SHFQ7M4L6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHFQ7M4L6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHFQ7M4L6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.02■□□□□ 0.64
SHFQ7M4L6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHFQ7M4L6 AC010141.3-201ENST00000456659 717 ntBASIC19.02■□□□□ 0.64
SHFQ7M4L6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.02■□□□□ 0.64
SHFQ7M4L6 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.02■□□□□ 0.64
SHFQ7M4L6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.02■□□□□ 0.63
SHFQ7M4L6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHFQ7M4L6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHFQ7M4L6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.01■□□□□ 0.63
SHFQ7M4L6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 AL512631.2-201ENST00000604634 923 ntBASIC19.01■□□□□ 0.63
SHFQ7M4L6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
SHFQ7M4L6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 AL049796.1-201ENST00000565336 1766 ntBASIC19.01■□□□□ 0.63
SHFQ7M4L6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHFQ7M4L6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 DUX4L19-201ENST00000557448 1267 ntBASIC19■□□□□ 0.63
SHFQ7M4L6 AL138724.1-201ENST00000606771 1088 ntBASIC19■□□□□ 0.63
SHFQ7M4L6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19■□□□□ 0.63
SHFQ7M4L6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19■□□□□ 0.63
SHFQ7M4L6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SHFQ7M4L6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHFQ7M4L6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms