Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf88Q6PI97 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
C11orf88Q6PI97 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C11orf88Q6PI97 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf88Q6PI97 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf88Q6PI97 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf88Q6PI97 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf88Q6PI97 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf88Q6PI97 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf88Q6PI97 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 AL512631.2-201ENST00000604634 923 ntBASIC18.25■□□□□ 0.51
C11orf88Q6PI97 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf88Q6PI97 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf88Q6PI97 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms