Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 AC138932.3-201ENST00000567634 1902 ntBASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PTCRAQ6ISU1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 TSPY7P-201ENST00000431358 1114 ntBASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTCRAQ6ISU1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 AC012618.2-201ENST00000428058 849 ntBASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 AC069544.1-201ENST00000609399 999 ntBASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 AC092368.3-202ENST00000574180 1591 ntBASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PTCRAQ6ISU1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
PTCRAQ6ISU1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AL445228.2-201ENST00000605589 952 ntBASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCRAQ6ISU1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 AL139125.2-201ENST00000623134 1869 ntBASIC22■■□□□ 1.11
PTCRAQ6ISU1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 AC233702.5-201ENST00000584107 538 ntBASIC22■■□□□ 1.11
PTCRAQ6ISU1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PTCRAQ6ISU1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PTCRAQ6ISU1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 RPS2P55-201ENST00000397318 883 ntBASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 RCN1P1-201ENST00000400413 996 ntBASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 AC107956.1-201ENST00000494359 873 ntBASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms