Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBR4Q5T4S7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 SLC25A3P1-201ENST00000443844 931 ntBASIC11.8□□□□□ -0.52
UBR4Q5T4S7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 LINC01568-207ENST00000641790 1380 ntBASIC11.8□□□□□ -0.52
UBR4Q5T4S7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.8□□□□□ -0.52
UBR4Q5T4S7 KRT8P10-201ENST00000450021 1447 ntBASIC11.8□□□□□ -0.52
UBR4Q5T4S7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.79□□□□□ -0.52
UBR4Q5T4S7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 AC010947.1-201ENST00000623454 693 ntBASIC11.79□□□□□ -0.52
UBR4Q5T4S7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.79□□□□□ -0.52
UBR4Q5T4S7 AC139426.1-201ENST00000568218 2529 ntBASIC11.79□□□□□ -0.52
UBR4Q5T4S7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 AL162412.1-201ENST00000567129 965 ntBASIC11.78□□□□□ -0.52
UBR4Q5T4S7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 HCG4P8-203ENST00000443049 980 ntBASIC11.78□□□□□ -0.52
UBR4Q5T4S7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 ALDH1A3-203ENST00000557963 1670 ntBASIC11.78□□□□□ -0.52
UBR4Q5T4S7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC11.78□□□□□ -0.52
UBR4Q5T4S7 AC092368.3-202ENST00000574180 1591 ntBASIC11.78□□□□□ -0.52
UBR4Q5T4S7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 HLA-J-203ENST00000494367 1087 ntBASIC11.77□□□□□ -0.52
UBR4Q5T4S7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 AL358472.4-201ENST00000633140 710 ntBASIC11.77□□□□□ -0.52
UBR4Q5T4S7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 AL845331.1-201ENST00000424978 1190 ntBASIC11.77□□□□□ -0.52
UBR4Q5T4S7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC11.77□□□□□ -0.52
UBR4Q5T4S7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 AC133681.1-201ENST00000465482 601 ntBASIC11.77□□□□□ -0.53
UBR4Q5T4S7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms