Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AL356441.2-201ENST00000443009 864 ntBASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIF1Q5T3J3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.93■□□□□ 0.78
LRIF1Q5T3J3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 LINC01006-201ENST00000333319 2292 ntBASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 SMUG1P1-201ENST00000590640 811 ntBASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIF1Q5T3J3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 AC133561.4-201ENST00000566112 224 ntBASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.91■□□□□ 0.78
LRIF1Q5T3J3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIF1Q5T3J3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.78
LRIF1Q5T3J3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRIF1Q5T3J3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 AC131281.2-201ENST00000520478 145 ntBASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIF1Q5T3J3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIF1Q5T3J3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms